PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK00466.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family GRAS
Protein Properties Length: 123aa    MW: 13768.6 Da    PI: 4.6512
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK00466.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS1034.3e-32212079195
       GRAS  79 aalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfe 177
                 a++l+++++P++ ++ ++aN+aI +a+ +++ +HiiD+++++ lQWp+L+++LasR+eg+p +lRiTg+ +++++   el++  + L + A++lgv+++
  PK00466.1   2 EAFQLLYQTTPFIALGCMIANEAICQAATNKDYLHIIDLGMEHTLQWPSLIRTLASRQEGSPkQLRITGLIDEDQTLVAELKTSMNSLVEEANSLGVTLK 101
                6899******************************************************88777*********9999************************ PP

       GRAS 178 fnvlvak.rledleleeLr 195
                fn++ ++ + + ++ e+L+
  PK00466.1 102 FNLISEQvTPSLFTKEKLD 120
                **97444355556666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098522.6921123IPR005202Transcription factor GRAS
PfamPF035141.5E-292120IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    Send to blast
IEAFQLLYQT TPFIALGCMI ANEAICQAAT NKDYLHIIDL GMEHTLQWPS LIRTLASRQE  60
GSPKQLRITG LIDEDQTLVA ELKTSMNSLV EEANSLGVTL KFNLISEQVT PSLFTKEKLD  120
LRX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010089231.11e-57hypothetical protein L484_004060
TrEMBLW9QHI81e-57W9QHI8_9R
STRINGGLYMA15G28410.22e-43(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132512730
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.12e-16GRAS family protein